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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942608.1_cds_XP_016486027.1_76898
CDS Infomation

[gene=LOC107806396] [db_xref=GeneID:107806396] [protein=protein kinase APK1A, chloroplastic-like] [protein_id=XP_016486027.1] [location=join(16240..16291,17780..18078,18237..18372,18464..18606,18699..18822,19023..19456)] [gbkey=CDS]
Sequence

ATGGGGTCTTGTATCAGTGTTCGAATTAAAGCCGAGTCTCCTCTTCATGCTGGAGCAAGT
GATGGAAGAGACTTGAGTAGTAGGCTTTCATATTCATCAGCTCCGTTGACTCCGCGGAGC
CAGAATGAGATCCTGGAATCCTCAAATCTGAAAAGCTTTAGTTTCAATGAACTCCGAGTA
GCCACGAGGAACTTCCGTCCAGATAGTGTGTTGGGAGAAGGCGGTTTTGGTTGTGTCTTT
AAGGGTTGGATCGATGAGCATACATTTAAAGCTGCACGGCCGGGAACTGGTTTGGTTATA
GCTGTTAAGAGATTGAACCAAGAGGGCTTTCAAGGTCACAAAGAATGGCTGGCAGAAATC
AATTACCTTGGTTCGCTTTCTCATCCTAATCTCGTGAAGTTGATTGGATATTGCTTAGAA
GATGAACACAGGCTTTTGGTATATGAGTTCATGCCTAGAGGAAGTTTGGAAAATCATCTG
TTCAGAAGGAGTACTTATTTCCAACCACTATCGTGGAATCTCCGGATGAAGGTTGCTCTT
GAGGCAGCAAAGGGACTGGCATATCTTCACAGCCCAGAAGCTAAAGTTATATATCGCGAT
TTCAAGTCATCTAACATTTTGCTGGATGCTAATTACAATGCGAAGCTTTCTGATTTTGGA
TTGGCGAAGGATGGACCAGTGGACGGTAAAAGCTATGTATCTACTAGAGTAATGGGTACC
TATGGTTATGCTGCTCCCGAGTATATGGCCACAGGCCACCTGACTGCAAGAAGTGACATA
TACAGTTTCGGGGTTGTTCTTCTAGAAATGCTGACAGGCCGTCGAGTGGTGGACAAAAAC
CGCCCTCACGGGGAGCAGAATCTAATTGAATGGGCTAAGCCTTTTCTTTCTAGTAAACGA
AAAGTCCTTCGTATTATGGATCCGCGTATAGAAGGTCAGTACTCAGTGGAAGGAGCACTA
AAGGCAGCACTTCTCGCGGTCAAATGCTTGGCATTAGAACCCAAATTCAGGCCCAAAATG
CACGAGGTCGTAAAAGCACTAGAGCAACTTCAGAACTCAAATGAATCGGGAAGTCTCAAA
CGTGATCAAACACAAAGGAAACATCGTAGAACCTGTACCGATGAAGCTTCAAGAAGAAAA
ACTTCGTCTTACCCGAGGCCAGCTGCTTCTCCTCAGCTTGTTACTTGA

Peptide Sequence

PEP ID

XP_016486027.1
PEP Infomation

PREDICTED: protein kinase APK1A, chloroplastic-like [Nicotiana tabacum]
Sequence

MGSCISVRIKAESPLHAGASDGRDLSSRLSYSSAPLTPRSQNEILESSNLKSFSFNELRV
ATRNFRPDSVLGEGGFGCVFKGWIDEHTFKAARPGTGLVIAVKRLNQEGFQGHKEWLAEI
NYLGSLSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRSTYFQPLSWNLRMKVAL
EAAKGLAYLHSPEAKVIYRDFKSSNILLDANYNAKLSDFGLAKDGPVDGKSYVSTRVMGT
YGYAAPEYMATGHLTARSDIYSFGVVLLEMLTGRRVVDKNRPHGEQNLIEWAKPFLSSKR
KVLRIMDPRIEGQYSVEGALKAALLAVKCLALEPKFRPKMHEVVKALEQLQNSNESGSLK
RDQTQRKHRRTCTDEASRRKTSSYPRPAASPQLVT

Transcript Sequence

Gene sequence data has not been registered.